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DS Updated information

02.29.2024 NEW
Announcement of the release of new features of “TogoVar”
02.01.2024 NEW
DBCLS will begin "review process" of the NBDC human database.
12.19.2023 NEW
Dr. Chiba received the Best Poster Paper Award in The 12th International Joint Conference on Knowledge Graphs.
12.01.2023 NEW
Announcement of the release of new features of “TogoVar”
12.01.2023 NEW
Exhibit DBCLS booth at MBSJ2023
11.16.2023 NEW
DBCLS server maintenance, 24-26 Nov 2023
11.02.2023 NEW
Change in the Operation of NBDC Human Database from Apr 2024.
10.23.2023 NEW
JST-NBDC/DBCLS Training: AJACS Online 18, 16 Nov. 2023
10.04.2023
Call for Proposals: The 8th Biomedical Linked Annotation Hackathon (BLAH8)
09.22.2023
An Article about TogoDX/Human were published in Jikken Igaku
09.22.2023
New publication in Scientific Data: "Development of an integrated and inferenceable RDF database of glycan, pathogen and disease resources"
09.13.2023
"TogoDX/Human" application has been updated to version 1.2.
09.13.2023
TogoMedium has been released.
09.04.2023
Exhibit DBCLS booth at the 75th SBJ Annual Meeting.
07.28.2023
“PanelSearch” and “CaseSharing” have been released as new functions of PubCaseFinder.
07.27.2023
BH23.9 (BioHackathon for domestic) registration opened.
07.27.2023
JST-NBDC/DBCLS Training: AJACS Online 17, 30 Aug. 2023
07.10.2023
JST-NBDC/DBCLS Training: AJACS Online 16, 27 Jul. 2023
07.10.2023
DBCLS starts operation of RDF Portal.
06.06.2023
DBCLS joins and contributes to the NEDO Green Innovation Fund Project in collaboration with seven institutions.
06.01.2023
Dr. Ono will give a talk at the Japan Open Science Summit 2023.
06.01.2023
Annual schedule of the AJACS FY2023 has been decided.
05.22.2023
Dr. Yamamoto’s research group received the Best Poster Award in the 16th Annual International Biocuration Conference.
05.12.2023
New publication in GigaScience: "A workflow reproducibility scale for automatic validation of biological interpretation results"
04.11.2023
A paper "CIRO: COVID-19 infection risk ontology" was published in PLoS One.
03.31.2023
ROIS and SUPSI signed a MoU for extending research collaboration between DBCLS and IDSIA.
03.31.2023
NBDC RDF Portal will change the provider, name and URL by Jul 2023.
03.31.2023
Call for participation: DBCLS BioHackathon 2023
03.08.2023
Dr. Ohta’s commentary on the paper was posted on GigaBlog.
03.02.2023
New publication in GigaScience: "Workflow sharing with automated metadata validation and test execution to improve the reusability of published workflows."
02.21.2023
DBCLS server maintenance, 25 Feb 2023
02.09.2023
Dr. Ono will give a talk about Article Processing Charges at the seminar on 17 Feb. 2023.
01.26.2023
Pedigree Finder: A Web-based Viewer for Knowledge Graphs of Crop Pedigrees has been developed.
01.26.2023
Updated 11 databases for "TogoDX/Human"
12.21.2022
NBDC/DBCLS Training: AJACS Online 15, 26 Jan. 2023
12.15.2022
A paper “TogoVar: A comprehensive Japanese genetic variation database” was published in Human Genome Variation.
12.13.2022
Dr. Ono will give a talk about the DOI registration for databases and web contents in the seminar.
12.02.2022
"Patient Locational Ontology-based Data (PLOD)" received the Grand Prize in LOD Challenge 2022.
12.02.2022
DBCLS server maintenance, 2-4 Dec 2022
11.24.2022
NBDC/DBCLS Training: AJACS Online 14, 22 Dec. 2022
11.14.2022
Added 14 new attributes and updated 10 databases for "TogoDX/Human"
11.02.2022
TogoVar has changed URL.
10.24.2022
A book on how to use bioinformatics tools and databases, edited and co-authored by DBCLS researchers, has been published.
10.19.2022
Added the functions to create, share, and publish playlists of video content on the TogoTV.
10.19.2022
NBDC/DBCLS Training: AJACS Online 13, 24 Nov. 2022
08.25.2022
TogoVar has been updated!
07.25.2022
NBDC/DBCLS Training: AJACS Online 12, 25 Aug. 2022
07.13.2022
A paper "TogoID: an exploratory ID converter to bridge biological datasets" was published in Bioinformatics.
06.29.2022
Illustration contents of TogoTV are now available on JSHG-WebCast (JWC).
06.20.2022
TogoDX/Human v1.1 has been released.
06.20.2022
The number of video contents published on TogoTV has reached 2,000!
06.17.2022
BH22.9 (BioHackathon for domestic) registration opened.
06.09.2022
A paper "Online tools for efficient paper writing" was published in Human Genome Variation.
06.09.2022
NBDC/DBCLS Training: AJACS Online 11, 28 Jul. 2022
06.01.2022
Annual schedule of the AJACS FY2022 has been decided.
05.27.2022
A paper "Advances in the development of PubCaseFinder, including the new application programming interface and matching algorithm" was published in the Human Mutation
04.28.2022
An Article about TogoID were published in Jikken Igaku (Experimental Medicine)
04.08.2022
Special issues of BMC Bioinformatics on BioNLP Open Shared Tasks 2019 were published.
03.02.2022
"MetaStanza" received the Excellence Award in LOD Challenge 2021.
02.07.2022
DBCLS server maintenance, 18-21 Feb 2022
01.27.2022
Video contents of TogoTV have been added and updated in JSHG-WebCast (JWC).
01.07.2022
Dr. Fujiwara will give a talk in the seminar on 27 Jan.2022.
12.10.2021
NBDC/DBCLS Training: AJACS Online 10, 20 Jan. 2022
11.30.2021
Articles were published in Jikken Igaku (Experimental Medicine). (in Japanese)
11.25.2021
Exhibit DBCLS booth at MBSJ2021 (in Japanese)
11.08.2021
DBCLS server maintenance, 12-14 Nov 2021
11.04.2021
NBDC/DBCLS Training: AJACS Online 9, 16 Dec. 2021
10.22.2021
Dr. Fujiwara's research group received the Best Poster Presentation Award in the JSHG-JSGDT2021.
10.18.2021
Video contents of TogoTV have been posted on JSHG-WebCast (JWC).
10.05.2021
TogoDX/Human has been released. (in Japanese)
10.01.2021
The September 2021 issue of Genomics & Informatics was published as a special issue on the BLAH7.
09.30.2021
A paper "Reference Transcriptome Data in Silkworm Bombyx mori" was published in Insects.
09.22.2021
Exhibit DBCLS booth at IIBMP2021 (in Japanese)
07.08.2021
TogoID has been released.
07.07.2021
A paper about the "Computation of Infection Risk via Confidential Locational Entries" has been published.
07.01.2021
NBDC/DBCLS Training: AJACS Online 8, 19 Aug. 2021
06.21.2021
BH21.8(BioHackathon for domestic) registration opened.
06.07.2021
DBCLS server maintenance, 6 Jul 2021
06.04.2021
NBDC/DBCLS Training: AJACS Online 7, 15 Jul. 2021
04.23.2021
NBDC/DBCLS Training: AJACS Online 6, 17 Jun. 2021
04.23.2021
Annual schedule of the AJACS FY2021 has been decided.
04.05.2021
Prof. Goto became the President of the Japanese Society for Bioinformatics.
04.05.2021
Articles were published in the JSBi News Letter.
02.04.2021
Notice: Questionnaire on AJACS Program FY2021
12.16.2020
BLAH7: The deadline for project registration, extended to Dec 20th.
12.09.2020
NBDC/DBCLS Training: AJACS Online, 13 Jan. 2021
11.27.2020
Exhibit NBDC/DBCLS booth at MBSJ2020 Online
11.17.2020
TogoTV website has been redesigned.
11.12.2020
NBDC/DBCLS Training: AJACS Online, 9 Dec. 2020
11.04.2020
DBCLS server maintenance, 27-29 Nov 2020
10.30.2020
Calls: The 7th Biomedical Linked Annotation Hackathon (BLAH7) Online
10.23.2020
NBDC/DBCLS Training: AJACS Online, 11 Nov. 2020
09.23.2020
NBDC/DBCLS Training: AJACS Online, 14 Oct. 2020
09.23.2020 ~ 9.25
International Symposium “Global Collaboration on Data beyond Disciplines”
08.20.2020
Exhibit DBCLS booth at IIBMP2020
08.06.2020
CRISPRdirect Docker version has been commercialized
07.28.2020
NBDC/DBCLS Training: AJACS Online, 16 Sep. 2020
07.08.2020
The June 2020 issue of Genomics Inform. was published as a special issue on the 6th Biomedical Linked Annotation Hackathon (BLAH6)
07.01.2020
BH20.9(BioHackathon for domestic) registration opened
05.29.2020
Cross-reactivity check system for COVID-19 diagnostic primers has been released
03.25.2020
GGGenome Docker version has been commercialized
02.26.2020
DBCLS server maintenance, 13-14 Mar 2020
02.21.2020
【Cancellation】 The Alliance of International Developers for Rare Diseases (AIDRD) Hackathon 2020
01.31.2020
The Alliance of International Developers for Rare Diseases (AIDRD) Hackathon 2020 registration is opened
01.27.2020
The 6th Biomedical Linked Annotation Hackathon (BLAH6) : Symposium Venue changed
01.27.2020
A paper “All of gene expression (AOE): An integrated index for public gene expression databases” was published in PLOS ONE.
01.20.2020
DBCLS server maintenance, 14-17 Feb 2020
01.10.2020
A paper “Meta‐Analysis of Hypoxic Transcriptomes from Public Databases” was published in Biomedicines
12.23.2019
The 6th Biomedical Linked Annotation Hackathon (BLAH6) registration is open for domestic attendees
12.18.2019
"JSON 2 LD Mapper" accelerating LOD conversion of data received the Progress Award in LOD Challenge 2019
12.06.2019
A paper “CRISPR-Cas3 induces broad and unidirectional genome editing in human cells” was published in Nature Communications.
11.28.2019
NBDC/DBCLS Training: AJACS Ryukyu, 15 Jan. 2020
11.25.2019
Call for Proposals: The 6th Biomedical Linked Annotation Hackathon (BLAH6)
11.14.2019
An article about "PubCaseFinder" was published in several papers
11.13.2019
A paper “Evaluation of off‐target effects of gapmer antisense oligonucleotides using human cells” was published in Genes to Cells.
10.16.2019
NBDC/DBCLS Training: AJACS Setagaya, 29 Nov. 2019
10.16.2019
A paper “Apoptosis-mediated vasa down-regulation controls developmental transformation in Japanese Copidosoma floridanum female soldiers” was published in Developmental Biology.
10.02.2019
RDF tutorial4, 31 Oct. 2019
08.23.2019
Togo2019 symposium registration opened
07.17.2019
NBDC/DBCLS Training: AJACS Miyazaki2, 28 Aug. 2019
07.10.2019
Worldwide Competition to Develop AI for Historical Japanese Character (Kuzushiji) Recognition
07.02.2019
NBDC/DBCLS Training: AJACS Bancho3, 7 Aug. 2019
07.01.2019
The June 2019 issue of Genomics & Informatics was published as a special issue on the 5th Biomedical Linked Annotation Hackathon (BLAH5).
06.25.2019
The 12th NBDC/DBCLS BioHackathon registration opened
06.25.2019
DBCLS Training: AJACS advanced 6th Kawachi, 25-26 Jul. 2019
06.13.2019
A paper “Split4Blank: Maintaining consistency while improving efficiency of loading RDF data with blank nodes” was published in PLOS ONE.
05.15.2019
BH19.7(BioHackathon for domestic) registration opened'
05.14.2019
A paper “Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection” was published in GigaScience.
04.16.2019
A paper “Cancerous phenotypes associated with hypoxia-inducible factors are not influenced by the volatile anesthetic isoflurane in renal cell carcinoma” was published in PLOS ONE.
04.01.2019
Call for the Collaboration Program at "ROIS-DS" for the F.Y. 2019.
03.25.2019~03.27
Exhibit DBCLS booth at JSBBA2019'
02.19.2019
A paper “Comparative analysis of seven types of superoxide dismutases for their ability to respond to oxidative stress in Bombyx mori” was published in Scientific Reports
01.31.2019
Closing of new review publication in First Authors and Leading Authors for details
01.21.2019
A paper "NBDC RDF portal: a comprehensive repository for semantic data in life sciences" was published in the Database journal
01.18.2019
A paper "TogoGenome/TogoStanza: modularized Semantic Web genome database" was published in the Database journal
12.26.2018
All-in-one Training and NBDC/DBCLS Training: AJACS Bancho-2, 28 Jan. 2019
12.20.2018
"JSON 2 LD Mapper" accelerating LOD conversion of data received the Progress Award in LOD Challenge 2018
12.20.2018
"SPARQL-proxy" middleware running between the client and the SPARQL endpoint received the Excellence Award in LOD Challenge 2018
11.30.2018
Closing of new review publication in First Authors
11.22.2018
Events that organized by DBCLS members will be held at MBSJ2018'
11.22.2018
Exhibit DBCLS booth at MBSJ2018'
11.12.2018~11.15
International Workshop on Data Science 2018
11.09.2018
A paper "ChIP-Atlas: a data-mining suite powered by full integration of public ChIP-seq data" was published in EMBO Reports.
11.09.2018
rdinfo2019@Tokyo registration opened
11.07.2018
NBDC/DBCLS Training: AJACS Nagoya2, 5 Dec. 2018
10.29.2018
The number of tutorial videos in TogoTV has reached 1,500
10.26.2018
DBCLS server maintenance, 16-18 Nov 2018
10.19.2018
The 11th NBDC/DBCLS BioHackathon registration opened
10.18.2018
RDF tutorial3, 1 Nov. 2018
10.11.2018
A paper "The jPOST environment: an integrated proteomics data repository and database" was published in Nucleic Acids Research Database Issue
10.02.2018
NBDC/DBCLS Training: AJACS Ezo4, 9 Nov. 2018
08.31.2018
A paper “PubCaseFinder: A Case-Report-Based, Phenotype-Driven Differential-Diagnosis System for Rare Diseases” was published in The American Journal of Human Genetics.
08.09.2018
Call for the Collaboration Program at “ROIS-DS” for the F.Y. 2018 (2nd time)
07.26.2018
NBDC/DBCLS Training: AJACS Bancho1, 29 Aug 2018
07.24.2018
Addition of FirstAuthors and LeadingAuthors to the NBDC Life Science Database Archive
07.24.2018
Renewal of LeadingAuthors website
07.13.2018
DBCLS Training: AJACS advanced 5th Kashiwa, 10 Aug. 2018
07.06.2018
Notice of site policy revision
06.26.2018
A paper “Suppression of mitochondrial oxygen metabolism mediated by the transcription factor HIF-1 alleviates propofol-induced cell toxicity” was published in Scientific Reports
06.14.2018
Togo2018 symposium registration opened
06.11.2018
NBDC/DBCLS Training: AJACS Tsukuba4, 10 Jul. 2018
06.05.2018
Renewed the DBCLS website
05.25.2018
NBDC/DBCLS Training: AJACS Echigo, 26-27 Jun. 2018
04.02.2018
Call for the Collaboration Program at ROIS "DS"